CARPentry Literature

The methodological underpinnings of virtually all features and concepts implemented in CARPentry were reported in detail in various journal publications. A selected non-exhaustive list of papers is found below.

[1]Bayer JD, Blake RC, Plank G, Trayanova NA. A Novel Rule-Based Algorithm for Assigning Myocardial Fiber Orientation to Computational Heart Models, Ann Biomed Eng 40(10):2243-54, 2012. [PubMed]
[2]Plank G, Liebmann M, Weber dos Santos R, Vigmond EJ, Haase G. Algebraic multigrid preconditioner for the cardiac bidomain model, IEEE Trans Biomed Eng. 54(4):585-96, 2007. [PubMed]
[3]Vigmond EJ, Weber dos Santos R, Prassl AJ, Deo M, Plank G. Solvers for the cardiac bidomain equations, Prog Biophys Mol Biol. 96(1-3):3-18, 2008. |PubMed|
[4]Augustin CM, Neic A, Liebmann M, Prassl AJ, Niederer SA, Haase G, Plank G. Anatomically accurate high resolution modeling of human whole heart electromechanics: A strongly scalable algebraic multigrid solver method for nonlinear deformation, J Comput Phys. 305:622-646, 2016. [PubMed]